Parrish Lab, University of Washington (2010-Present)


Trimming of Sequence Reads Alters RNA-Seq Gene Expression Estimates

Claire R. Williams, Alyssa Baccarella, Jay Z. Parrish, Charles C. Kim (2016). BMC Bioinformatics (in press)


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Epidermis-derived Semaphorin Promotes Dendrite Self-Avoidance by Regulating Dendrite-Substrate Adhesion in Drosophila Sensory Neurons

Shan Meltzer, Smita Yadav, Jiae Lee, Peter Soba, Susan H. Younger, Peng Jin, Wei Zhang, Jay Parrish, Lily Yeh Jan, Yuh Nung Jan (2016). Neuron 89: 741-755. PMID: 26853303.

http://www.ncbi.nlm.nih.gov/pubmed/26853303


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Functions of the SLC36 transporter Pathetic in growth control.

Lin, WY, Williams, CR, Yan, C, and Parrish, JZ (2016). Fly doi: 10.1080/19336934.2015.1129089

http://www.ncbi.nlm.nih.gov/pubmed/26735916


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Regulation of dendrite growth and maintenance by exocytosis.

Yun Peng, Jiae Lee, Kimberly Rowland, Yuhui Wen, Hope Hua, Nicole Carlson, Shweta Lavania, Jay Z. Parrish, Michael D. Kim (2015). Journal of Cell Science 128: 4279-4292. PMCID: PMC4712815

http://www.ncbi.nlm.nih.gov/pubmed/26483382


Identification of an amino acid transporter required to support extreme growth in neurons.

Lin, W.Y., Williams, C., Luedke, K.A., Yan, C., Ahn, J., Morrison, N., Bloomsburg, S., Duncan, K., Kim, C.K., and Parrish, J.Z. (2015).  Genes & Development  29:1120-1135. PMCID: PMC4470281.

http://www.ncbi.nlm.nih.gov/pubmed/26063572


Coordinate control of terminal dendrite patterning and dynamics by the novel membrane protein Raw

Lee, J., Lin, W., and Parrish, J.Z. (2015). Development 142:1-12. PMCID: PMC25480915.

http://www.ncbi.nlm.nih.gov/pubmed/25480915


Krüppel mediates the selective rebalancing of ion channel expression

Parrish, J.Z.*†, Kim, C.K.*†, Tang, L., Bergquist, S., Wang, T., DeRisi, J.L., Jan, L.Y., Jan, Y.N., and Davis, G.W† (2014). Neuron 82: 537-544. PMCID: PMC4104505. *authors contributed equally, †authors for correspondence 

http://www.ncbi.nlm.nih.gov/pubmed/24924190


The microRNA bantam regulates a developmental transition in epithelial cells that restricts sensory dendrite growth

Jiang, N., Soba, P., Parker, E., Kim, C.K., and Parrish, J.Z. (2014). Development 141:2657-68. PMCID: PMC4067962. (see also: Keeping dendrites in check, Development 2014 141:e1302 )

http://www.ncbi.nlm.nih.gov/pubmed/24924190


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Nmnat exerts neuroprotective effects in axons and dendrites

Yuhui Wen, Jay Z. Parrish, Ruina He, R. Grace Zhai, and Michael D. Kim. (2011) Mol Cel Neurosci. 48:1-8

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3152617/


Jan Lab, Univ. of California San Francisco (2003-2009)




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The tumour suppressor Hippo acts with the NDR kinases in dendritic tiling and maintenance

Emoto K, Parrish JZ, Jan LY, Jan YN (2006) Nature 443:210-213

http://www.ncbi.nlm.nih.gov/pubmed/16906135


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Genome-wide analyses identify transcription factors required for proper morphogenesis of Drosophila sensory neuron dendrites.

Parrish JZ, Kim, MD, Jan LY, Jan YN (2006) Genes & Development 20:820-835

http://www.ncbi.nlm.nih.gov/pubmed/16547170